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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11021911 chr11:11557573 C/T C11orf46 chr11:30344649-30359978:+ -0.59 -6.03 3.91E-9 Box Plot
BLCA rs11021911 chr11:11557573 C/T C11orf58 chr11:16634679-16778428:+ -0.56 -6.4 4.66E-10 Box Plot
BLCA rs11021911 chr11:11557573 C/T RHOG chr11:3848208-3862213:- -0.42 -6.18 1.6E-9 Box Plot
BLCA rs11021911 chr11:11557573 C/T SPTY2D1 chr11:18627948-18656338:- -0.53 -6.33 6.68E-10 Box Plot
BLCA rs11023726 chr11:15828077 A/G SAAL1 chr11:18091482-18127638:- 0.77 7.31 1.53E-12 Box Plot
BLCA rs11023726 chr11:15828077 A/G TSG101 chr11:18489883-18548779:- 0.78 6.1 2.6E-9 Box Plot
BLCA rs11031699 chr11:32324117 C/G COMMD9 chr11:36290834-36310999:- 0.74 5.99 4.82E-9 Box Plot
BLCA rs11033686 chr11:36561978 A/G AMBRA1 chr11:46417964-46615675:- 0.76 6.29 8.48E-10 Box Plot
BLCA rs11033686 chr11:36561978 A/G C11orf58 chr11:16634679-16778428:+ 0.59 6.03 3.96E-9 Box Plot
BLCA rs11033686 chr11:36561978 A/G GTF2H1 chr11:18343842-18388591:+ 0.66 6.29 8.48E-10 Box Plot
BLCA rs11033686 chr11:36561978 A/G MTCH2 chr11:47638867-47664175:- 0.74 6.43 3.77E-10 Box Plot
BLCA rs11033686 chr11:36561978 A/G NUP98 chr11:3692313-3819022:- 0.63 6.55 1.84E-10 Box Plot
BLCA rs11033686 chr11:36561978 A/G PEX16 chr11:45931220-45940363:- 0.62 6.39 4.76E-10 Box Plot
BLCA rs11033686 chr11:36561978 A/G PSMA1 chr11:14526420-14665181:- 0.66 6.2 1.43E-9 Box Plot
BLCA rs11033686 chr11:36561978 A/G PSMD13 chr11:236546-252984:+ 0.62 6.71 6.88E-11 Box Plot